A B C D E F G H I L M N O P Q R S T U V W X

G

gDay - Static variable in interface info.sswap.api.model.SSWAPDatatype.XSD
xsd:gDay
generateRQG(RDG, RDG) - Method in interface info.sswap.api.spi.APIProvider
 
generateRQG(RDG, RDG, URI) - Method in interface info.sswap.api.spi.APIProvider
 
generateRQG(RDG, RDG) - Static method in class info.sswap.api.spi.ExtensionAPI
 
generateRQG(RDG, RDG, URI) - Static method in class info.sswap.api.spi.ExtensionAPI
 
get() - Static method in class info.sswap.api.model.Config
Getter for the singleton instance of the config.
get() - Static method in class info.sswap.api.model.VersionInformation
Static getter for the version information.
get() - Static method in class info.sswap.api.servlet.CacheHandler
Accessor to the singleton instance
get() - Static method in class info.sswap.api.servlet.ContentCache
Accessor for the singleton instance
get(String) - Method in class info.sswap.api.servlet.ContentCache
Gets an entry for a (possibly future) RRG.
get() - Static method in class info.sswap.api.servlet.ContentCacheHandler
Accessor to the singleton instance
get() - Static method in class info.sswap.api.servlet.RRGCache
Accessor for the singleton instance
get(String) - Method in class info.sswap.api.servlet.RRGCache
Gets an entry for a (possibly future) RRG.
getAboutURI() - Method in interface info.sswap.api.model.SSWAPProvider
Gets the URI pointing to a human-readable description of this provider.
getAboutURI() - Method in interface info.sswap.api.model.SSWAPResource
Gets the URI pointing to a human-readable description of this resource.
getAccessors() - Method in interface info.sswap.ontologies.data.api.Data
Return a set of URIs of declared accessors for the data.
getAsyncRIG(URI, URI) - Method in interface info.sswap.api.spi.APIProvider
 
getAsyncRIG(URI, URI) - Static method in class info.sswap.api.spi.ExtensionAPI
 
getCache() - Static method in class info.sswap.api.model.SSWAP
Gets a cache used to store ontology terms that were retrieved from the network.
getCache() - Method in interface info.sswap.api.spi.APIProvider
 
getClient() - Static method in class info.sswap.api.spi.HTTPAPI
Getter for a new Client.
getClosureDocument(SSWAPDocument) - Method in interface info.sswap.api.spi.APIProvider
 
getClosureDocument(SSWAPDocument) - Static method in class info.sswap.api.spi.ExtensionAPI
Gets the SSWAPDocument that contains the closure of the specified document.
getCommandLine(String) - Method in interface info.sswap.ontologies.exec.api.Exec
Basic parsing and sanity checking of the command line.
getComment() - Method in interface info.sswap.api.model.SSWAPElement
Returns that rdfs:comment value of this type or null if no comment exists.
getContent() - Method in interface info.sswap.api.http.HTTPResponse
Return the response content from the server
getData() - Method in interface info.sswap.ontologies.data.api.Directory
For every data:hasData statement on the subject individual (set at the DataFactory.Directory(SSWAPIndividual)), return a Collection of Data objects constructed from property instance values.
getDatatype(URI) - Method in interface info.sswap.api.model.SSWAPDocument
Gets a named datatype object
getDatatypePredicateRange() - Method in interface info.sswap.api.model.SSWAPPredicate
Gets the datatype for the range for a datatype predicate.
getDatatypePredicateRanges() - Method in interface info.sswap.api.model.SSWAPPredicate
Gets all the datatypes for the range for a datatype predicate.
getDatatypeURI() - Method in interface info.sswap.api.model.SSWAPLiteral
Gets the URI of the datatype.
getDeclaredType() - Method in interface info.sswap.api.model.SSWAPIndividual
Gets a single type for this individual that summarizes all the declared types.
getDeclaredTypes() - Method in interface info.sswap.api.model.SSWAPIndividual
Gets all declared types of the individual.
getDirectory() - Method in interface info.sswap.api.model.Cache
Gets the directory where the cache contents are stored.
getDocument() - Method in interface info.sswap.api.model.SSWAPModel
Retrieves the document that contains this SSWAPModel
getDomain() - Method in interface info.sswap.api.model.SSWAPPredicate
Retrieves information about the domain of the specified predicate.
getErrorStream() - Method in interface info.sswap.api.http.HTTPResponse
Return the error stream from the connection
getException() - Method in interface info.sswap.api.http.HTTPResponse
Access to an underlying exception that may have been thrown upon failure to generate a response.
getFormats() - Method in interface info.sswap.ontologies.data.api.Data
Get explicit and inferred subTypes of data:DataFormat
getGraph() - Method in interface info.sswap.api.model.SSWAPResource
Gets the SSWAP graph of the resource.
getGraph() - Method in interface info.sswap.api.model.SSWAPSubject
Gets the graph to which this subject belongs.
getGraphs() - Method in interface info.sswap.api.model.SSWAPResource
Gets all the SSWAP graphs of the resource.
getGraphs() - Method in interface info.sswap.api.model.SSWAPSubject
Gets the graphs to which this subject belongs.
getHeaders() - Method in interface info.sswap.api.http.HTTPResponse
Return all headers returned by the server
getHeaderValue(String) - Method in interface info.sswap.api.http.HTTPResponse
Returns the unparsed value of the HTTP header
getHeaderValues(String) - Method in interface info.sswap.api.http.HTTPResponse
Returns the values of the HTTP header parsed on the comma delimiter
getIcon() - Method in interface info.sswap.api.model.SSWAPResource
Gets the URI of the icon for this resource (if defined).
getID() - Method in interface info.sswap.api.model.SSWAPNode
Gets a unique identifier of this node.
getImports() - Method in interface info.sswap.api.model.SSWAPModel
Gets the list of OWL imports in this model (the top-level only).
getIndividual() - Method in interface info.sswap.api.model.SSWAPProperty
Gets the individual for which this property is assigned.
getIndividual() - Method in interface info.sswap.ontologies.data.api.Data
 
getIndividual() - Method in interface info.sswap.ontologies.data.api.Directory
The individual subject for the data:hasData statements.
getInferredABox(SSWAPDocument) - Method in interface info.sswap.api.spi.APIProvider
Gets the document that contains the ABox of this document (including both inferred and asserted statements).
getInferredABox(SSWAPDocument) - Static method in class info.sswap.api.spi.ExtensionAPI
Gets the document that contains the ABox of this document (including both inferred and asserted statements).
getInferredDocument(SSWAPDocument) - Method in interface info.sswap.api.spi.APIProvider
 
getInferredDocument(SSWAPDocument) - Static method in class info.sswap.api.spi.ExtensionAPI
Gets the SSWAPDocument that contains all the inferred facts for the specified document (and subsequently it also contains its closure, which is required to compute the inferred facts).
getInferredIndividual() - Method in interface info.sswap.api.model.SSWAPIndividual
Retrieves an inferred view (a copy) of the individual.
getInferredTBox(SSWAPDocument) - Method in interface info.sswap.api.spi.APIProvider
Gets the document that contains the TBox of this document (including both inferred and asserted statements).
getInferredTBox(SSWAPDocument) - Static method in class info.sswap.api.spi.ExtensionAPI
Gets the document that contains the TBox of this document (including both inferred and asserted statements).
getInferredTypeURIs(SSWAPIndividual) - Method in interface info.sswap.api.spi.APIProvider
 
getInferredTypeURIs(SSWAPIndividual) - Static method in class info.sswap.api.spi.ExtensionAPI
 
getInputStream() - Method in interface info.sswap.api.model.SSWAPModel
Get input stream suitable for reading the serialized model.
getInputURI() - Method in interface info.sswap.api.model.SSWAPResource
Gets the URI pointing to a human-readable user interface for this resource.
getLabel() - Method in interface info.sswap.api.model.SSWAPElement
Returns that rdfs:label value of this type or null if no label exists.
getLanguage() - Method in interface info.sswap.api.model.SSWAPLiteral
Gets the language of the literal (if specified)
getMappings() - Method in interface info.sswap.api.model.SSWAPProtocol
Gets a map from SSWAPGraphs to SSWAPSubjects
getMessage() - Method in interface info.sswap.api.http.HTTPResponse
Return the response message from the server
getMetadata() - Method in interface info.sswap.api.model.SSWAPProvider
Gets the URI containing the machine-readable metadata for this provider.
getMetadata() - Method in interface info.sswap.api.model.SSWAPResource
Gets the URI containing the machine-readable metadata for this resource.
getMIMEType() - Method in enum info.sswap.api.model.RDFRepresentation
 
getName() - Method in interface info.sswap.api.model.SSWAPProvider
Gets the name of the provider.
getName() - Method in interface info.sswap.api.model.SSWAPResource
Gets the name of the resource.
getNsPrefixMap() - Method in interface info.sswap.api.model.SSWAPModel
Gets the map of currently defined namespace prefixes.
getObject() - Method in interface info.sswap.api.model.SSWAPSubject
Gets the object, onto which this subject is mapped.
getObjectPredicateRange() - Method in interface info.sswap.api.model.SSWAPPredicate
Gets the type for the range for an object predicate.
getObjectPredicateRanges() - Method in interface info.sswap.api.model.SSWAPPredicate
Gets all the types for the range for an object predicate.
getObjects() - Method in interface info.sswap.api.model.SSWAPSubject
Gets all the objects, onto which this subject is mapped.
getOneLineDescription() - Method in interface info.sswap.api.model.SSWAPProvider
Gets one line description of the provider.
getOneLineDescription() - Method in interface info.sswap.api.model.SSWAPResource
Gets one line description of the resource.
getOutputURI() - Method in interface info.sswap.api.model.SSWAPResource
 
getParsers() - Method in interface info.sswap.ontologies.data.api.Data
Return a set of URIs for declared parsers for the data.
getPDG() - Method in interface info.sswap.api.http.HTTPProvider.PDGResponse
Getter method to get the Provider Description Graph (PDG) from a successful conversion.
getPDG(URI) - Static method in class info.sswap.api.model.SSWAP
Creates an object representing an PDG.
getPDG() - Method in interface info.sswap.api.model.SSWAPProvider
Gets the PDG that defines this provider
getPDG(URI) - Method in interface info.sswap.api.spi.APIProvider
Gets an undereferenced PDG implementation.
getPredicate(URI) - Method in interface info.sswap.api.model.SSWAPDocument
Gets a SSWAPPredicate object for the given property URI.
getPredicate() - Method in interface info.sswap.api.model.SSWAPProperty
Gets the SSWAPPredicate for this property.
getProperties() - Method in interface info.sswap.api.model.SSWAPIndividual
Gets all the properties for this individual.
getProperties(SSWAPPredicate) - Method in interface info.sswap.api.model.SSWAPIndividual
Gets all the properties (and their values) for the predicate
getProperty(String) - Method in class info.sswap.api.model.Config
Gets the value of the specified property.
getProperty(String, String) - Method in class info.sswap.api.model.Config
Gets the value of the specified property or the specified default value, if the default value is not defined.
getProperty(SSWAPPredicate) - Method in interface info.sswap.api.model.SSWAPIndividual
Gets the property by its Predicate.
getProvider() - Method in interface info.sswap.api.model.PDG
Gets the provider described in this PDG.
getProvider() - Method in interface info.sswap.api.model.SSWAPProtocol
Gets the SSWAP provider for this canonical graph (or more exactly the SSWAPProvider of the SSWAPResource in the file).
getProvider() - Method in interface info.sswap.api.model.SSWAPResource
Gets the object describing the provider of this resource.
getProvider() - Static method in class info.sswap.api.spi.HTTPAPI
Getter for a new Provider.
getProvidesResources() - Method in interface info.sswap.api.model.SSWAPProvider
Gets the information about all the resources provided by this provider.
getQuery() - Method in interface info.sswap.api.model.RQG
Gets a SPARQL query that can be executed over a model containing RDGs to determine which RDGs match this RQG.
getRDG() - Method in interface info.sswap.api.http.HTTPProvider.RDGResponse
Getter method to get the Resource Description Graph (RDG) from a successful conversion.
getRDG(URI) - Static method in class info.sswap.api.model.SSWAP
Creates an object representing an RDG.
getRDG() - Method in interface info.sswap.api.model.SSWAPResource
Gets the RDG where this resource is defined.
getRDG(URI) - Method in interface info.sswap.api.spi.APIProvider
Gets a dereferenced RDG implementation
getRDGs() - Method in interface info.sswap.api.model.PDG
Gets all RDGs pointed to by a sswap:providesResource statement in this PDG
getReasoningService() - Method in interface info.sswap.api.model.SSWAPModel
Gets the reasoning service associated with the underlying RDF data
getReleaseDate() - Method in class info.sswap.api.model.VersionInformation
Returns the date of the release
getResource() - Method in interface info.sswap.api.model.SSWAPGraph
Gets the resource to which this graph belongs
getResource() - Method in interface info.sswap.api.model.SSWAPProtocol
Gets the SSWAPResource in the file
getResourceGraph(InputStream, Class<T>) - Static method in class info.sswap.api.model.SSWAP
Creates a SSWAPDocument graph from its serialization in an input stream.
getResourceGraph(InputStream, Class<T>, URI) - Static method in class info.sswap.api.model.SSWAP
Creates a SSWAPDocument graph from its serialization in an input stream.
getResourceGraph(InputStream, Class<T>, URI) - Method in interface info.sswap.api.spi.APIProvider
Creates a SSWAPDocument graph from its serialization in an input stream.
getResponseCode() - Method in interface info.sswap.api.http.HTTPResponse
Return the response code
getResponseCode() - Method in exception info.sswap.api.servlet.ClientException
The HTTP response (status) code 400 Request Entity Too Large
getResponseCode() - Method in exception info.sswap.api.servlet.RequestEntityTooLargeException
The HTTP response (status) code 413 Request Entity Too Large
getRIG() - Method in interface info.sswap.api.http.HTTPClient.RIGResponse
Getter method to get the RIG from a successful conversion.
getRIG() - Method in interface info.sswap.api.model.RDG
Gets the RIG that can be used to invoke the service described in this RDG (after setting the values for the properties).
getRIG(InputStream) - Method in interface info.sswap.api.model.RDG
Creates a RIG object based on the serialized RIG (e.g., sent by a client of a service).
getRQG() - Method in interface info.sswap.api.http.HTTPClient.RQGResponse
Getter method to get the RQG from a successful conversion.
getRQG(InputStream) - Static method in class info.sswap.api.model.SSWAP
Reads an RQG from an input stream.
getRQG(InputStream) - Method in interface info.sswap.api.spi.APIProvider
Reads an RQG from an input stream.
getRRG() - Method in interface info.sswap.api.http.HTTPProvider.RRGResponse
Getter method to get the Resource Response Graph (RRG) from a successful conversion.
getRRG() - Method in interface info.sswap.api.model.RIG
Gets the RRG that can be used to create a response to the RIG.
getRRG(InputStream) - Method in interface info.sswap.api.model.RIG
Creates an RRG based on the serialized RRG data (e.g., sent by a provider of the service in response to this RIG having been sent to the provider).
getSerializers() - Method in interface info.sswap.ontologies.data.api.Data
Return a set of URIs for declared serializers for the data.
getServiceClass() - Method in class info.sswap.api.servlet.SimpleSSWAPServlet
Declare the class (e.g., MyService that performs the service.
getServlet() - Method in class info.sswap.api.servlet.MapsTo
The servlet for which this service class is performing.
getSSWAPExceptionHeader() - Method in interface info.sswap.api.http.HTTPResponse
Returns the header being used for SSWAP Exceptions.
getSSWAPExceptionValues() - Method in interface info.sswap.api.http.HTTPResponse
Returns values, if any, for the SSWAP Exception Header(s).
getSubject() - Method in interface info.sswap.api.model.SSWAPGraph
Gets the subject of the graph.
getSubject() - Method in interface info.sswap.api.model.SSWAPObject
Gets the subject that maps onto this object.
getSubjects() - Method in interface info.sswap.api.model.SSWAPGraph
Gets all the subjects of the graph.
getSubjects() - Method in interface info.sswap.api.model.SSWAPObject
Gets all the subjects that map onto this object.
getTimeout() - Method in class info.sswap.api.servlet.AbstractSSWAPServlet
The servlet timeout value, in milliseconds.
getTimeToLive() - Method in interface info.sswap.api.model.Cache
Gets the current time-to-live for entries in this cache; that is, the time after which an entry in this cache is considered stale, and will be retrieved again from its source.
getTranslatedResource() - Method in interface info.sswap.api.model.RIG
Returns a read-only copy of the SSWAPResource with properties and types of this RIG translated into the vocabulary of the RDG.
getTranslatedSubjects() - Method in interface info.sswap.api.model.RIG
Returns a read-only copy of the SSWAPSubject from all matching SSWAPGraphs with properties and types of this RIG translated into the vocabulary of the RDG.
getType(URI) - Method in interface info.sswap.api.model.SSWAPDocument
Gets a SSWAPType for an URI.
getType() - Method in interface info.sswap.api.model.SSWAPIndividual
Gets a single type for this individual that summarizes all the types for this individual (both explicitly declared and inferred).
getTypes() - Method in interface info.sswap.api.model.SSWAPIndividual
Gets all types for this individual (including both explicitly declared types and inferred types).
getTypeSignature(URI) - Method in interface info.sswap.api.model.SSWAPModel
Get the terms that comprise the definition of a URI term.
getUntranslatedNode(T) - Method in interface info.sswap.api.spi.APIProvider
 
getUntranslatedNode(T) - Static method in class info.sswap.api.spi.ExtensionAPI
Return the source node (SSWAPResource or SSWAPSubject) from which the translatedNode was derived.
getURI() - Method in interface info.sswap.api.model.SSWAPModel
Get the URI.
getValidators() - Method in interface info.sswap.ontologies.data.api.Data
Return a set of URIs for declared validators for the data.
getValue() - Method in interface info.sswap.api.model.SSWAPProperty
Gets the value of the property.
getVersionInformation() - Static method in class info.sswap.api.model.SSWAP
 
getVersionString() - Method in class info.sswap.api.model.VersionInformation
Returns the version of Java API
gMonth - Static variable in interface info.sswap.api.model.SSWAPDatatype.XSD
xsd:gMonth
gMonthDay - Static variable in interface info.sswap.api.model.SSWAPDatatype.XSD
xsd:gMonthDay
gYear - Static variable in interface info.sswap.api.model.SSWAPDatatype.XSD
xsd:gYear
gYearMonth - Static variable in interface info.sswap.api.model.SSWAPDatatype.XSD
xsd:gYearMonth

A B C D E F G H I L M N O P Q R S T U V W X
Copyright (c) 2011, iPlant Collaborative, University of Arizona, Cold Spring Harbor Laboratories, University of Texas at Austin.