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EHCACHE_CONF_FILE
- Static variable in class info.sswap.api.servlet.
ContentCache
Name of resource that contains EHCache configuration file
EHCACHE_CONF_FILE
- Static variable in class info.sswap.api.servlet.
RRGCache
Name of resource that contains EHCache configuration file
ElementImpl
- Class in
info.sswap.impl.empire.model
Implements a SSWAPElement (an element in SSWAP other than an RDF data source like a PDG or a canonical/protocol graph)
ElementImpl()
- Constructor for class info.sswap.impl.empire.model.
ElementImpl
EmpireGeneratedNodeImpl
- Class in
info.sswap.impl.empire.model
An abstract class containing methods common to all Empire-generated SSWAPIndividuals.
EmpireGeneratedNodeImpl()
- Constructor for class info.sswap.impl.empire.model.
EmpireGeneratedNodeImpl
encodedUsernameAndPassword
- Variable in class info.sswap.ontologies.data.impl.
HTTPBasicAuthenticationAccessor
enqueueHierarchyURIs(Model)
- Method in class info.sswap.impl.empire.io.
ClosureBuilder
enqueueURI(String)
- Method in class info.sswap.impl.empire.io.
ClosureBuilder
Add a URI to the dereference queue, unless the URI has been already processed (i.e., has either been dereferenced or is awaiting dereference).
enqueueURIs(Model)
- Method in class info.sswap.impl.empire.io.
ClosureBuilder
Add URIs of all resources to a dereference queue (unless they have already been processed).
ensureProperView(List<? extends ModelImpl>, Class<T>)
- Method in class info.sswap.impl.empire.model.
EmpireGeneratedNodeImpl
ensureProperView(ModelImpl, Class<T>)
- Method in class info.sswap.impl.empire.model.
EmpireGeneratedNodeImpl
ENTITY
- Static variable in interface info.sswap.api.model.
SSWAPDatatype.XSD
xsd:ENTITY
entityManager
- Variable in class info.sswap.impl.empire.model.
SourceModelImpl
The entity manager that creates Empire objects based on the information from the Jena model.
entityManagerFactory
- Variable in class info.sswap.impl.empire.model.
ImplFactory
The factory for creating Empire EntityManagers (one manager for each Jena model/data source).
entryTTL
- Variable in class info.sswap.impl.empire.io.
ModelCache
The time-to-live (TTL) for entries in ms.
EnumeratedInput
- Interface in
info.sswap.api.input
Represents an enumerated input where the allowed values should be chosen from a given set of values.
EnumeratedInputImpl
- Class in
info.sswap.api.input.impl
EnumeratedInputImpl(Collection<InputValue>)
- Constructor for class info.sswap.api.input.impl.
EnumeratedInputImpl
EOF
- Static variable in class info.sswap.ontologies.exec.impl.
ExecImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
AtomicInputImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
BNodeValueImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
EnumeratedInputImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
IntersectionInputImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
LiteralValueImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
PropertyInputImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
UnionInputImpl
equals(Object)
- Method in class info.sswap.api.input.impl.
URIValueImpl
equals(Object)
- Method in class info.sswap.impl.empire.model.
DatatypeImpl
equals(Object)
- Method in class info.sswap.impl.empire.model.
IndividualImpl
Overridden equals() method.
equals(Object)
- Method in class info.sswap.impl.empire.model.
Literal
equals(Object)
- Method in class info.sswap.impl.empire.model.
PredicateImpl
equals(Object)
- Method in class info.sswap.impl.empire.model.
PropertyImpl
equals(Object)
- Method in class info.sswap.impl.empire.model.
ReasoningServiceImpl.ReasoningTaskBase.ClassIndividualMapping
Overridden equals() method.
equals(Object)
- Method in class info.sswap.impl.empire.model.
SourceModelImpl
equals(Object)
- Method in class info.sswap.impl.empire.model.
TypeImpl
error(Exception)
- Method in class info.sswap.impl.empire.model.
JenaModelFactory.ErrorHandler
Method used by Jena to report that an error occurred
errorMessage
- Variable in class info.sswap.api.servlet.
RRGCache.Entry
The error message (if there is one; it may be null)
errors
- Variable in class info.sswap.impl.empire.model.
JenaModelFactory.ErrorHandler
exception
- Variable in class info.sswap.impl.http.
AbstractHTTPResponse
Exec
- Interface in
info.sswap.ontologies.exec.api
Execution of legacy programs.
ExecException
- Exception in
info.sswap.ontologies.exec.api
Root class for all Exec-specific exceptions.
ExecException()
- Constructor for exception info.sswap.ontologies.exec.api.
ExecException
Creates a new exception
ExecException(String)
- Constructor for exception info.sswap.ontologies.exec.api.
ExecException
Creates a new exception with the specified message
ExecException(Throwable)
- Constructor for exception info.sswap.ontologies.exec.api.
ExecException
Creates a new exception with the specified underlying cause
ExecException(String, Throwable)
- Constructor for exception info.sswap.ontologies.exec.api.
ExecException
Creates a new exception with the specified message and the underlying cause
ExecImpl
- Class in
info.sswap.ontologies.exec.impl
Implementation for ExecServlet.
ExecImpl()
- Constructor for class info.sswap.ontologies.exec.impl.
ExecImpl
ExecServlet
- Class in
info.sswap.ontologies.exec.api
The Exec servlet allows the wrapping of legacy, non-semantic programs as semantic web services.
ExecServlet()
- Constructor for class info.sswap.ontologies.exec.api.
ExecServlet
executeQuery(Model...)
- Method in interface info.sswap.api.model.
RQG
Creates and executes a SPARQL query that determines which RDGs match this RQG.
executeQuery(Model...)
- Method in class info.sswap.impl.empire.model.
RQGImpl
executeRequest(URLConnection)
- Static method in class info.sswap.impl.empire.model.
ModelUtils
Executes the HTTP request associated with the given connection without any input.
executeRequest(URLConnection, InputStream)
- Static method in class info.sswap.impl.empire.model.
ModelUtils
Executes the HTTP request associated with the given connection with the given input which may be null.
executeRequest(URLConnection, InputStream, boolean)
- Static method in class info.sswap.impl.empire.model.
ModelUtils
Executes the HTTP request associated with the given connection with the given input which may be null.
EXECUTION_STATUS_HEADER
- Static variable in class info.sswap.api.servlet.
CacheHandler
executorService
- Variable in class info.sswap.impl.empire.io.
ClosureBuilder.DereferenceTask
The executor service that will execute this task
existsTyped(SourceModel, URI)
- Method in class info.sswap.impl.empire.model.
ImplFactory
EXPLANATION_SYNTAX
- Static variable in class info.sswap.impl.empire.model.
ReasoningServiceImpl
Expressivity
- Enum in
info.sswap.api.model
Enumeration for different expressivities of the underlying RDF data.
Expressivity()
- Constructor for enum info.sswap.api.model.
Expressivity
expressivityChecker
- Variable in class info.sswap.impl.empire.io.
ClosureBuilder
ExpressivityChecker
- Class in
info.sswap.impl.empire.model
Checks whether an OWLOntology has a specified expressivity
ExpressivityChecker()
- Constructor for class info.sswap.impl.empire.model.
ExpressivityChecker
Creates a new expressivity checker
expressivityChecker
- Variable in class info.sswap.impl.empire.model.
SourceModelImpl
ExpressivityChecker.ProfileViolationDescriptionGenerator
- Class in
info.sswap.impl.empire.model
ExpressivityChecker.ProfileViolationDescriptionGenerator()
- Constructor for class info.sswap.impl.empire.model.
ExpressivityChecker.ProfileViolationDescriptionGenerator
ExtensionAPI
- Class in
info.sswap.api.spi
An API for extensions of the basic SSWAP API.
ExtensionAPI()
- Constructor for class info.sswap.api.spi.
ExtensionAPI
extractABox()
- Method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
Extracts the ABox from the current OntModel
extractABox(Model)
- Static method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
extractInferredIndividualModel(URI)
- Method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
extractInferredModel()
- Method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
extractOutputURI(SSWAPModel)
- Method in class info.sswap.api.servlet.
AbstractSSWAPServlet
Extracts sswap:outputURI from the sswap:Resource in this SSWAPModel.
extractTBox()
- Method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
Extracts the TBox from the current OntModel
extractTBox(Model)
- Static method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
extractTypeDefinition(Model, Resource)
- Static method in class info.sswap.impl.empire.model.
ReasoningServiceImpl
Extracts all the statements that make up an anonymous type.
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Copyright (c) 2011, iPlant Collaborative, University of Arizona, Cold Spring Harbor Laboratories, University of Texas at Austin.